- A Thousand-Mile Walk to the Gulf
- Cruise of the Revenue-Steamer Corwin in Alaska and the N.W. Arctic Ocean in 1881: Botanical Notes: Notes and Memoranda: Medical and Anthropological; Botanical; Ornithological.
- Letters to a Friend, Written to Mrs. Ezra S. Carr, 1866-1879
- My First Summer in the Sierra
- Our National Parks
- Steep Trails
- Stickeen
- The Grand CaƱon of the Colorado
- The Mountains of California
- The Story of My Boyhood and Youth
- The Yosemite
- Travels in Alaska