• Aids to the Study of the Maya Codices: Sixth Annual Report of the Bureau of Ethnology to the Secretary of the Smithsonian Institution, 1884-85, Government Printing Office, Washington, 1888, pages 253-372
• Burial Mounds of the Northern Sections of the United States
• Day Symbols of the Maya Year: Sixteenth Annual Report of the Bureau of American Ethnology to the Secretary of the Smithsonian Institution, 1894-1895, Government Printing Office, Washington, 1897, pages 199-266.
• Notes on Certain Maya and Mexican Manuscripts: Third Annual Report of the Bureau of Ethnology to the Secretary of the Smithsonian Institution, 1881-82, Government Printing Office, Washington, 1884, pages 3-66